Workflow-install

Tool to install workflows on a Galaxy instance.

Usage

usage: workflow-install [-h] [-v] [-g GALAXY] [-u USER] [-p PASSWORD]
                        [-a API_KEY] -w WORKFLOW_PATH [--publish_workflows]

Named Arguments

-w, --workflow_path
 Path to a workflow file or a directory with multiple workflow files ending with “.ga”
--publish_workflows
 

Flag to publish all imported workflows, so that they are viewable by other users

Default: False

General options

-v, --verbose

Increase output verbosity.

Default: False

Galaxy connection

-g, --galaxy

Target Galaxy instance URL/IP address

Default: “http://localhost:8080

-u, --user Galaxy user name
-p, --password Password for the Galaxy user
-a, --api_key Galaxy admin user API key (required if not defined in the tools list file)