Setup-data-libraries

Tool to setup data libraries on a galaxy instance

Usage

Populate the Galaxy data library with data.

usage: setup-data-libraries [-h] [-v] [-g GALAXY] [-u USER] [-p PASSWORD]
                            [-a API_KEY] -i INFILE [--training] [--legacy]

Named Arguments

-i, --infile
--training	Set defaults that make sense for training data. Default: False
--legacy	Use legacy APIs even for newer Galaxies that should have a batch upload API enabled. Default: False

General options

-v, --verbose

Increase output verbosity. Default: False

Galaxy connection

-g, --galaxy	Target Galaxy instance URL/IP address Default: “http://localhost:8080”
-u, --user	Galaxy user name
-p, --password	Password for the Galaxy user
-a, --api_key	Galaxy admin user API key (required if not defined in the tools list file)