Get-tool-list¶
Tool to extract a tool list from galaxy.
Usage¶
usage: usage: python get-tool-list <options>
- Optional Arguments
-o, --output-file tool_list.yml output file -include_id=False, --include_tool_panel_id=False Include tool_panel_id in tool_list.yml ? Use this only if the tool panel id already exists. See https://github.com/galaxyproject/ansible-galaxy-tools/blob/master/files/tool_list.yaml.sample -skip_name=False, --skip_tool_panel_name=False Do not include tool_panel_name in tool_list.yml ? -skip_changeset=False, --skip_changeset_revision=False Do not include the changeset revision when generating the tool list.Use this if you would like to use the list to update all the tools inyour galaxy instance using shed-install. - Galaxy connection
-v=False, --verbose=False Increase output verbosity. -g="http://localhost:8080", --galaxy="http://localhost:8080" Target Galaxy instance URL/IP address
Example usage: python get_tool_yml_from_gi.py -g https://usegalaxy.org/ -o tool_list.yml